Viral Panels

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NGS Viral Panels

Comprehensive Viral Research Panel

The Twist Comprehensive Viral Research Panel is a highly versatile tool designed for comprehensive novel virus detection. It consists of 1,052,421 unique probes derived from reference sequences in databases like RefSeq, FluDB, and VIPR, covering a wide range of viral families affecting humans and animals. This panel can detect novel and evolved viral strains, including those related to specific outbreaks.

The panel demonstrates success in detecting highly divergent viral sequences, such as the spike region of a newly discovered coronavirus and a segment from an H1N1 influenza outbreak. With a mismatch sensitivity defined through various tests, it can capture highly evolved viral sequences with over 99.8% coverage.

Furthermore, the Twist Comprehensive Viral Research Panel allows for the enrichment of novel viruses, showcasing its ability to capture sequences with up to 10% variation. It also supports multiplex detection of diverse viruses, making it suitable for metagenomic applications in various sample types. In a co-infection assay, the panel successfully captured four different virus types spiked into human RNA with high efficiency, demonstrating its multiplexing capabilities.

NGS-Fixed-Panel-Comp-Virus-Research-Tree-2
NGS-Fixed-Panel-Comp-Virus-Research-Enrichment-Novel-Viruses
Respiratory Virus Research Panel

The Twist Respiratory Panel is a powerful tool designed for the detection of common human respiratory pathogens through a single test. It comprises 41,047 probes compiled from the GenBank database, allowing researchers to distinguish COVID-19 symptoms from those of other respiratory illnesses, whether influenza- or non-influenza-related. This panel facilitates high-resolution Next-Generation Sequencing (NGS) by enriching viral sequences, enabling the high-sensitivity detection of viral material, even in challenging samples, with more than 5000x enrichment. Post-enrichment, it achieves coverage of over 99.9% of the genome at 1X or greater.

The panel demonstrates its effectiveness in detecting viral standards from different viral families. Synthetic Viral Controls, when spiked into human carrier RNA, show significant enrichment, with over 70% of reads coming from viral genomes, representing at least a 2500-fold enrichment over the spiked-in content.

Furthermore, the Twist Respiratory Panel supports multiplexing for higher throughput and lower cost. Comparisons using multiplex and single-plex hybridization reactions at different viral titers show that 8-plex capture provides comparable efficient enrichment as a single-plex capture. This is demonstrated using the Twist Synthetic Viral Controls and the Twist Respiratory Virus Research Panel, showcasing the versatility and cost-effectiveness of multiplexing in this respiratory virus detection system.

NGS-Respiratory-Viral-Controls-Multiplexing
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    Exome Panels

    About Twist Bioscience Alliance Panels

    Twist Alliance Panels are a curated collection of high-quality, ready-to-use sequencing panels developed in partnership with leading scientific institutions. By combining Twist’s world-class oligonucleotide synthesis platform with our partners’ deep expertise, these panels provide comprehensive, validated coverage of clinically and scientifically relevant regions. Ready-made and scalable, they streamline workflows, save time and resources, and support research, clinical, and diagnostic applications—so your team can focus on discovery instead of design.

    Twist Alliance VCGS Exome v2

    High-performance diagnostic exome panel for heritable diseases

    When routine testing does not yield a diagnosis, DNA sequencing panels are often the next step—especially for suspected heritable conditions. Developed in collaboration between Victorian Clinical Genetics Services (VCGS) and Twist, the Twist Alliance VCGS Exome v2 provides comprehensive coverage of clinically relevant regions while maintaining high uniformity across the exome.

    Key Features

    1. Whole exome coverage (54.82 Mb) with enhanced capture of clinically significant genes (Mendeliome)

    2. Dedicated coverage of pathogenic non-coding loci, ensuring clinically relevant variants outside traditional exons are captured

    3. CNV detection backbone: probes across intergenic regions (~25 kb intervals) improve copy number variation calling

    4. Highly uniform panel optimized for carrier screening, pre-natal, and post-natal testing

    Probe Content

    ComponentNumber of Probes
    Twist Exome 2.0427K
    VCGS-curated content101K
    Total528K
    Twist Alliance VCGS Exome - 40.1 MB​

     

    Ordering Options

    111124 Twist Alliance VCGS Exome v2 – 54.82 Mb, 2 Reactions Kit

    111126 Twist Alliance VCGS Exome v2 – 54.82 Mb, 12 Reactions Kit

    111150 Twist Alliance VCGS Exome v2 – 54.82 Mb, 96 Reactions Kit

    Twist Alliance Clinical Research Exome - 34.9 MB

    Flexible exome panel for research and clinical discovery

    Designed in collaboration with the Broad Institute Genomics Platform, the Twist Alliance Clinical Research Exome uses validated clinical patient data to provide comprehensive exome coverage. This panel enables efficient investigation of cancer, rare, and inherited disease-associated regions while maintaining high uniformity and throughput.

    Key Features

    1. Comprehensive exome coverage (34.9 Mb) with flexibility for content customization using Twist’s NGS platform

    2. Supplemental enrichment of clinically relevant coding and non-coding regions, including cancer-associated loci and rare disease genes

    3. High uniformity probes allow cost-efficient per-sample processing and high throughput—successfully applied to >250,000 samples at the Broad Institute

    4. Validated design for research and clinical discovery

    Panel Content Highlights

    ComponentDescription
    Twist Core ExomeStandard exome coverage
    Mitochondrial GenomeFull coverage of mitochondrial DNA
    ACMG73 GenesClinically actionable targets
    OMIM & COSMIC RegionsSupplemental coverage of disease- and cancer-associated loci
    Broad-defined TargetsAdditional validated coding and non-coding regions

    Ordering Options

    104032 Twist Alliance Clinical Research Exome – 34.9 MB, 2 Reactions Kit

    104033 Twist Alliance Clinical Research Exome – 34.9 MB, 12 Reactions Kit

    104034 Twist Alliance Clinical Research Exome – 34.9 MB, 96 Reactions Kit

    Exome 2.0

    Twist Exome 2.0 is designed to detect rare and inherited diseases, as well as germline cancers. This panel’s high uniformity and low off-target rate deliver best-in-class sequencing efficiency, enabling quality data to be collected with less sequencing. With superior coverage of major genetic databases (RefSeq, CCDS, GenCode, Clinvar, ACMG73 and more) and the addition of clinically relevant non-coding pathogenic and likely pathogenic variants, Twist Exome 2.0 provides the value of multiple clinical panels all wrapped into one, easily customizable package.

    Chris Wicky

    Clinical Genomics Manager - ANZ & Country Manager - NZ

    Get a complete overview of Twist Alliance Panels, including panel coverage, workflow efficiency, and application scope. For guidance on selecting or integrating these panels into your research or diagnostic operations, Decode Science provides personalized support and local assistance.

    Mouse Exome Panel

    The mouse is an extremely important model system for studying genetic variation, tumor mutations, and phenotypic outcomes as well as the therapeutic effect of pharmaceutical agents. As genetic variant databases are continuously updated, the Twist Mouse Exome panel is thoughtfully designed and built from the most current databases. When combined with Twist’s expanding portfolio of library preparation and enrichment reagents, the complete toolset allows researchers to achieve industry-leading coverage across target regions while optimizing sequencing cost and sample throughput.

    Mouse Strain
    Twist Alliance Canine Exome - 40.5 MB

    Understanding the genetic variations among dog breeds is crucial for unraveling the genetic regulation of traits and understanding the basis and progression of diseases in dogs. Comprehensive gene panels, such as exomes, play a pivotal role in enhancing veterinary diagnostics and associated clinical medicine. These Next-Generation Sequencing (NGS) panels, like the Twist Alliance Canine Exome developed in collaboration with the Broad Institute’s Karlsson lab, are essential tools for advancing canine genomic research. They contribute to improved understanding of canine cancers and potential therapeutics.

    The Twist Alliance Canine Exome panel is designed to achieve the following objectives:

    1. Covers coding exons of canine genes.
    2. Facilitates comparative genomic studies between canine and human genomes.
    3. Includes regions of known importance in human cancers.
    4. Allows for cost-effective deep sequencing.

    Furthermore, canine genomic research has demonstrated benefits for human medical research, revealing genetic similarities between human and canine tumors, such as Copy Number Variations (CNVs), differential gene expressions, and structural chromosome abnormalities. This interdisciplinary approach underscores the potential for insights gained in canine genetics to contribute to advancements in human medicine.

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    Ready To Order?
    As the authorised distributor for Twist Bioscience’s in Australia and New Zealand, Decode Science makes adopting these exome panels effortless. We connect your lab with ultra-high-throughput panels, helping you implement for faster, more reliable genomic results—with local support and guidance whenever you need it.
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    STOmics Offline Software

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    STOmics Offline Software

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    Spatial Omics Analysis Suite Overview: ImageStudio, SAW, and StereoMap

    ImageStudio:

    1. ImageStudio is a SpatioTemporal omics offline image processing software.
    2. It assesses image quality, focusing on sharpness and track lines, determining suitability for downstream data analysis.
    3. The manual adjustment module addresses scenarios beyond the software’s capabilities.

    SAW (Stereo-seq Analysis Workflow):

    1. SAW integrates Stereo-seq spatial group gene expression analysis tools.
    2. It reduces and visualizes spatial expression information from sequencing data on microarrays.
    3. Spatial expression matrices generated by SAW are suitable for downstream analysis.

    StereoMap:

    1. StereoMap is a high-definition visual desktop software designed for Stereo-seq data analysis results.
    2. It visualizes STOmics’ SpatioTemporal omics technologies, allowing further exploration through various tools.
    3. GEF matrix, image RPI and IPR data, and clustering results from SAW can be displayed in StereoMap.
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    STOmics Cloud

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      STOmics Cloud

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      STOmics Cloud

      STOmics Cloud
      STOmics Cloud is a spatial-temporal data analysis platform for managing and analyzing multi-omics data. The platform is centered around projects, enabling users to seamlessly integrate data and tools into their projects, ensuring traceable analysis processes, reproducible results, knowledge sharing, and project collaboration. Additionally, STOmics Cloud offers a user-friendly portal interface, providing code-free data analysis, high-resolution visualization, and personalized analysis services.
      STOmics Cloud

      What You Can Achieve

      Data Analysis

      Data Visualization

      Data Storage

      Data Sharing

      STOmics Cloud Workflow

      STOmics Cloud Workflow
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        Stereo-seq Transcriptomics for Large Chip Designs

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        Stereo-seq Transcriptomics for Large Chip Designs

        Stereo-seq Transcriptomics for Large Chip Designs

        STOmics Stereo-seq Transcriptomics for Large Chip Designs (LCD) pioneers the whole transcriptome study for entire tissue sections. Stereo-seq for Large Chip Designs is firstly offered to the market – 1cm x 2cm, 2cm x 2cm, 2cm x 3cm. Compatible for all species (FF samples), it enables a “tissue-to-data” solution through in situ capture of the whole transcriptome, at nanoscale resolution and centimeter-sized field of view.

        Stereo-seq Transcriptomics for Large Chip Designs

        Stereo-seq Transcriptomics for Large Chip Designs Workflow

        Stereo-seq Transcriptomics for Large Chip Designs workflow
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        Stereo-seq Transcriptomics solution

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        Stereo-seq Transcriptomics for Large Chip Designs

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          Stereo-seq Transcriptomics H&E solution

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          Stereo-seq Transcriptomics H&E solution

          Stereo-seq Transcriptomics H&E solution

          Unlock the potential of integrating tissue phenotyping and spatial heterogeneity profiling of molecular information. By incorporating H&E-stained tissue morphological information, Stereo-seq Transcriptomics H&E solution will better assist with tissue type identification, profiling of specific tissue regions of interests (ROIs), and conducting downstream differential analysis between selected ROIs.

          Stereo-seq Transcriptomics H&E solution

          Stereo-seq Transcriptomics H&E solution workflow

          Stereo-seq Transcriptomics H&E solution workflow
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          Stereo-seq Transcriptomics for Large Chip Designs

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            Stereo-seq Transcriptomics mIF solution

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            Stereo-seq Transcriptomics mIF solution

            Stereo-seq Transcriptomics mIF solution

            STOmics Stereo-seq Transcriptomics Set for Chip-on-a-slide enables a “tissue-to-data” solution through in situ capture of the whole transcriptome, at nanoscale resolution and centimeter-sized field of view. Stereo-seq Transcriptomics Solution utilizes DNB patterned array chips loaded with spatially-barcoded probes that capture and prime poly-adenylated mRNA from tissue sections in situ. Each cDNA synthesized from mRNA captured on a particular spot is linked to its spatially-barcoded probe, allowing subsequent gene expression mapping of a tissue section following sequencing and visualization analysis using the StereoMap visualization platform.

            Stereo-seq Transcriptomics mIF solution

            Stereo-seq Transcriptomics mIF solution workflow

            Stereo-seq Transcriptomics mIF solution workflow
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            Stereo-seq Transcriptomics solution

            Stereo-seq Transcriptomics mIF solution

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            Stereo-seq Transcriptomics for Large Chip Designs

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              Stereo-seq Transcriptomics solution

              PRODUCTS

              Stereo-seq Transcriptomics solution

              Stereo-seq Transcriptomics solution

              STOmics Stereo-seq Transcriptomics Set for Chip-on-a-slide enables a “tissue-to-data” solution through in situ capture of the whole transcriptome, at nanoscale resolution and centimeter-sized field of view. Stereo-seq Transcriptomics Solution utilizes DNB patterned array chips loaded with spatially-barcoded probes that capture and prime poly-adenylated mRNA from tissue sections in situ. Each cDNA synthesized from mRNA captured on a particular spot is linked to its spatially-barcoded probe, allowing subsequent gene expression mapping of a tissue section following sequencing and visualization analysis using the StereoMap visualization platform.

              Stereo-seq Transcriptomics solution

              Stereo-seq Transcriptomics solution Workflow

              Stereo-seq Transcriptomics solution Workflow
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              STOmics Kits Portfolio

              Stereo-seq Transcriptomics solution

              Stereo-seq Transcriptomics mIF solution

              Stereo-seq Transcriptomics H&E solution

              Stereo-seq Transcriptomics for Large Chip Designs

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