STOmics Offline Software

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STOmics Offline Software

STOmics Offline Software

Spatial Omics Analysis Suite Overview: ImageStudio, SAW, and StereoMap

ImageStudio:

  1. ImageStudio is a SpatioTemporal omics offline image processing software.
  2. It assesses image quality, focusing on sharpness and track lines, determining suitability for downstream data analysis.
  3. The manual adjustment module addresses scenarios beyond the software’s capabilities.

SAW (Stereo-seq Analysis Workflow):

  1. SAW integrates Stereo-seq spatial group gene expression analysis tools.
  2. It reduces and visualizes spatial expression information from sequencing data on microarrays.
  3. Spatial expression matrices generated by SAW are suitable for downstream analysis.

StereoMap:

  1. StereoMap is a high-definition visual desktop software designed for Stereo-seq data analysis results.
  2. It visualizes STOmics’ SpatioTemporal omics technologies, allowing further exploration through various tools.
  3. GEF matrix, image RPI and IPR data, and clustering results from SAW can be displayed in StereoMap.
STOmics Offline Software
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STOmics Software Portfolio

STOmics Offline Software

STOmics Cloud

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    STOmics Cloud

    PRODUCTS

    STOmics Cloud

    STOmics Cloud
    STOmics Cloud is a spatial-temporal data analysis platform for managing and analyzing multi-omics data. The platform is centered around projects, enabling users to seamlessly integrate data and tools into their projects, ensuring traceable analysis processes, reproducible results, knowledge sharing, and project collaboration. Additionally, STOmics Cloud offers a user-friendly portal interface, providing code-free data analysis, high-resolution visualization, and personalized analysis services.
    STOmics Cloud

    What You Can Achieve

    Data Analysis

    Data Visualization

    Data Storage

    Data Sharing

    STOmics Cloud Workflow

    STOmics Cloud Workflow
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    STOmics Software Portfolio

    STOmics Offline Software

    STOmics Cloud

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      Stereo-seq Transcriptomics for Large Chip Designs

      PRODUCTS

      Stereo-seq Transcriptomics for Large Chip Designs

      Stereo-seq Transcriptomics for Large Chip Designs

      STOmics Stereo-seq Transcriptomics for Large Chip Designs (LCD) pioneers the whole transcriptome study for entire tissue sections. Stereo-seq for Large Chip Designs is firstly offered to the market – 1cm x 2cm, 2cm x 2cm, 2cm x 3cm. Compatible for all species (FF samples), it enables a “tissue-to-data” solution through in situ capture of the whole transcriptome, at nanoscale resolution and centimeter-sized field of view.

      Stereo-seq Transcriptomics for Large Chip Designs

      Stereo-seq Transcriptomics for Large Chip Designs Workflow

      Stereo-seq Transcriptomics for Large Chip Designs workflow
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      STOmics Kits Portfolio

      Stereo-seq Transcriptomics solution

      Stereo-seq Transcriptomics mIF solution

      Stereo-seq Transcriptomics H&E solution

      Stereo-seq Transcriptomics for Large Chip Designs

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      Get a call from your local Decode Science representative to help you find the best fit genomics products for you.

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        Stereo-seq Transcriptomics H&E solution

        PRODUCTS

        Stereo-seq Transcriptomics H&E solution

        Stereo-seq Transcriptomics H&E solution

        Unlock the potential of integrating tissue phenotyping and spatial heterogeneity profiling of molecular information. By incorporating H&E-stained tissue morphological information, Stereo-seq Transcriptomics H&E solution will better assist with tissue type identification, profiling of specific tissue regions of interests (ROIs), and conducting downstream differential analysis between selected ROIs.

        Stereo-seq Transcriptomics H&E solution

        Stereo-seq Transcriptomics H&E solution workflow

        Stereo-seq Transcriptomics H&E solution workflow
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        STOmics Kits Portfolio

        Stereo-seq Transcriptomics solution

        Stereo-seq Transcriptomics mIF solution

        Stereo-seq Transcriptomics H&E solution

        Stereo-seq Transcriptomics for Large Chip Designs

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        Get a call from your local Decode Science representative to help you find the best fit genomics products for you.

          Or give us a call at:

          1300 581 991

          Stereo-seq Transcriptomics mIF solution

          PRODUCTS

          Stereo-seq Transcriptomics mIF solution

          Stereo-seq Transcriptomics mIF solution

          STOmics Stereo-seq Transcriptomics Set for Chip-on-a-slide enables a “tissue-to-data” solution through in situ capture of the whole transcriptome, at nanoscale resolution and centimeter-sized field of view. Stereo-seq Transcriptomics Solution utilizes DNB patterned array chips loaded with spatially-barcoded probes that capture and prime poly-adenylated mRNA from tissue sections in situ. Each cDNA synthesized from mRNA captured on a particular spot is linked to its spatially-barcoded probe, allowing subsequent gene expression mapping of a tissue section following sequencing and visualization analysis using the StereoMap visualization platform.

          Stereo-seq Transcriptomics mIF solution

          Stereo-seq Transcriptomics mIF solution workflow

          Stereo-seq Transcriptomics mIF solution workflow
          Ready To Order?
          Our team can help you in placing the order. Click below to get a quote and fast ordering.
          STOmics Kits Portfolio

          Stereo-seq Transcriptomics solution

          Stereo-seq Transcriptomics mIF solution

          Stereo-seq Transcriptomics H&E solution

          Stereo-seq Transcriptomics for Large Chip Designs

          Have a question?

          Get a call from your local Decode Science representative to help you find the best fit genomics products for you.

            Or give us a call at:

            1300 581 991

            Stereo-seq Transcriptomics solution

            PRODUCTS

            Stereo-seq Transcriptomics solution

            Stereo-seq Transcriptomics solution

            STOmics Stereo-seq Transcriptomics Set for Chip-on-a-slide enables a “tissue-to-data” solution through in situ capture of the whole transcriptome, at nanoscale resolution and centimeter-sized field of view. Stereo-seq Transcriptomics Solution utilizes DNB patterned array chips loaded with spatially-barcoded probes that capture and prime poly-adenylated mRNA from tissue sections in situ. Each cDNA synthesized from mRNA captured on a particular spot is linked to its spatially-barcoded probe, allowing subsequent gene expression mapping of a tissue section following sequencing and visualization analysis using the StereoMap visualization platform.

            Stereo-seq Transcriptomics solution

            Stereo-seq Transcriptomics solution Workflow

            Stereo-seq Transcriptomics solution Workflow
            Ready To Order?
            Our team can help you in placing the order. Click below to get a quote and fast ordering.
            STOmics Kits Portfolio

            Stereo-seq Transcriptomics solution

            Stereo-seq Transcriptomics mIF solution

            Stereo-seq Transcriptomics H&E solution

            Stereo-seq Transcriptomics for Large Chip Designs

            Have a question?

            Get a call from your local Decode Science representative to help you find the best fit genomics products for you.

              Or give us a call at:

              1300 581 991